YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55249755, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELWPGAWTA LLLLLLLLLS TLWFCSSSAK YFFKMAFYNG WILFLAILAI PVCAVRGRNV  60
   61 ENMKILRLLL LHVKYLYGIR VEVRGAQHFP PTQPYVVVSN HQSSLDLLGM MEVLPDRCVP 120
  121 IAKRELLWAG SAGLACWLAG VIFIDRKRTG DAISVMSEVA QTLLTQDVRV WVFPEGTRNH 180
  181 NGSMLPFKRG AFHLAVQAQV PIVPIVMSSY QDFYCKKERR FTSGRCQVRV LPPVPTEGLT 240
  241 PDDVPALADR VRHSMLTIFR EISTDGLGGG DCLKKPGGAG EARL

Type	Start	End	Confidence
Signal Peptide	1	29	0.74
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	284	0.70