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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IL6RB_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.80
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALRIWLMQ ALLIFLTTES IGQLVEPCGY IYPEFPVVQR GSNFTATCVL KEKCLQVYSV  60
   61 NATYIVWKTN HVAVPKEQVT VINRTASSVT FTDVVFQNVQ LTCNILSFGQ IEQNVYGITI 120
  121 LSGYPPDIPT NLSCIVNEGK NMLCQLDPGR ETYLETNYTL KSEWATEKFP DCRTKHGTSS 180
  181 CMMGYTPIYF VNIEVWVEAE NALGNVSSEP INFDPVDKVK PSPPHNLSVT NSEELSSILK 240
  241 LAWVNSGLDS ILRLKSDIQY RTKDASTWIQ VPLEDTVSPR TSFTVQDLKP FTEYVFRIRS 300
  301 IKENGKGYWS DWSEEASGTT YEDRPSKAPS FWYKVNANHP QEYRSARLIW KTLPLSEANG 360
  361 KILDYEVVLT QSKSVSQTYT VNGTELIVNL TNNRYVASLA ARNVVGKSPA TVLTIPGSHF 420
  421 KASHPVVDLK AFPKDNLLWV EWTPPSKPVN KYILEWCVLS ENSPCIPDWQ QEDGTVNRTH 480
  481 LRGSLLESKC YLITVTPVFP GGPGSPESMK AYLKQAAPSK GPTVRTKKVG KNEAVLEWDH 540
  541 LPVDVQNGFI RNYSISYRTS VGKEMVVRVD SSHTEYTLSS LSSDTLYMVH MAAYTEEGGK 600
  601 DGPEFTFTTL KFAQGEIEAI VVPVCLAFLL TTLLGVLFCF NKRDLIKKHI WPNVPDPSKS 660
  661 HIAQWSPHTP PRHNFNSKDQ MYSDANFTDV SVVEIEANNK KPCPDDLKSL DLFKKEKIST 720
  721 EGHSSGIGGS SCMSSSRPSI SSSEENESAQ STASTVQYST VVHSGYRHQV PSVQVFSRSE 780
  781 STQPLLDSEE RPEDLQLVDS VDSGDEILPR QQYFKQSCSQ PGASPDVSHF GRSSQVPSGS 840
  841 EEDFVRLKQQ QVSDHISEPY GSEQRRLFQE GSVADALGTG TDGQIERFES VGMETAMDED 900
  901 ISKSYLPQTV RQGGYMPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle