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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CP2CN_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLGFTTLA LVVSVTCLSL LSVWTKLRTR GRLPPGPTPL PIIGNLLQLN LKDIPASLSK  60
   61 LAKEYGPVYT LYFGTSPTVV LHGYDVVKEA LLQQGDEFLG RGPLPIIEDT HKGYGLIFSN 120
  121 GERWKVMRRF SLMTLRNFGM GKRSLEERVQ EEARCLVEEL QKTKAQPFDP TFILACAPCN 180
  181 VICSILFNDR FQYNDKTFLN LMDLLNKNFQ QVNSVWCQMY NLWPTIIKYL PGKHIEFAKR 240
  241 IDDVKNFILE KVKEHQKSLD PANPRDYIDC FLSKIEEEKD NLKSEFHLEN LAVCGSNLFT 300
  301 AGTETTSTTL RFGLLLLMKY PEVQAKVHEE LDRVIGRHQP PSMKDKMKLP YTDAVLHEIQ 360
  361 RYITLLPSSL PHAVVQDTKF RDYVIPKGTT VLPMLSSVML DQKEFANPEK FDPGHFLDKN 420
  421 GCFKKTDYFV PFSLGKRACV GESLARMELF LFFTTLLQKF SLKTLVEPKD LDIKPITTGI 480
  481 INLPPPYKLC LVPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle