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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GRM2_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLGFLAL LLLWGAVAEG PAKKVLTLEG DLVLGGLFPV HQKGGPAEEC GPVNEHRGIQ  60
   61 RLEAMLFALD RINRDPHLLP GVRLGAHILD SCSKDTHALE QALDFVRASL SRGADGSRHI 120
  121 CPDGSYATHS DAPTAVTGVI GGSYSDVSIQ VANLLRLFQI PQISYASTSA KLSDKSRYDY 180
  181 FARTVPPDFF QAKAMAEILR FFNWTYVSTV ASEGDYGETG IEAFELEARA RNICVATSEK 240
  241 VGRAMSRAAF EGVVRALLQK PSARVAVLFT RSEDARELLA ATQRLNASFT WVASDGWGAL 300
  301 ESVVAGSERA AEGAITIELA SYPISDFASY FQSLDPWNNS RNPWFREFWE ERFHCSFRQR 360
  361 DCAAHSLRAV PFEQESKIMF VVNAVYAMAH ALHNMHRALC PNTTHLCDAM RPVNGRRLYK 420
  421 DFVLNVKFDA PFRPADTDDE VRFDRFGDGI GRYNIFTYLR AGSGRYRYQK VGYWAEGLTL 480
  481 DTSFIPWASP SAGPLPASRC SEPCLQNEVK SVQPGEVCCW LCIPCQPYEY RLDEFTCADC 540
  541 GLGYWPNASL TGCFELPQEY IRWGDAWAVG PVTIACLGAL ATLFVLGVFV RHNATPVVKA 600
  601 SGRELCYILL GGVFLCYCMT FVFIAKPSTA VCTLRRLGLG TAFSVCYSAL LTKTNRIARI 660
  661 FGGAREGAQR PRFISPASQV AICLALISGQ LLIVAAWLVV EAPGTGKETA PERREVVTLR 720
  721 CNHRDASMLG SLAYNVLLIA LCTLYAFKTR KCPENFNEAK FIGFTMYTTC IIWLAFLPIF 780
  781 YVTSSDYRVQ TTTMCVSVSL SGSVVLGCLF APKLHIILFQ PQKNVVSHRA PTSRFGSAAP 840
  841 RASANLGQGS GSQFVPTVCN GREVVDSTTS SL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle