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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MAGT1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPRWLWCV CATAAVTLLL VSKVPSASAQ RKKEKVLVEK VIQLMEWTNQ RPVIRMNGDK  60
   61 FRPLVKAPPR NYSVIVMFTA LQLHRQCVVC KQADEEFQIL ANFWRYSSAF TNRIFFAMVD 120
  121 FDEGSDVFQM LNMNSAPTFI NFPPKGKPKR ADTYELQVRG FSAEQIARWI ADRTDVNIRV 180
  181 IRPPNYAGPL MLGLLLAVIG GLVYLRRSNM EFLFNKTGWA FAALCFVLAM TSGQMWNHIR 240
  241 GPPYAHKNPH TGHVNYIHGS SQAQFVAETH IVLLFNGGVT LGMVLLCEAA ASDMDIGKRR 300
  301 MMCIAGIGLV VLFFSWMLSI FRSKYHGYPY SFLMS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle