YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NPTXR_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLAVLLAA GMLAFLGAVI CIIASVPLAA SPARALPGGT DNASAASAAG APGPQRSLSA  60
   61 LQGAGGSAGP SVLPGEPAAS VFPPPPGPLL SRFLCTPLAA ACPSGAEQGD AAGERAELLL 120
  121 LQSTAEQLRQ TALQQEARIR ADRDTIRELT GKLGRCESGL PRGLQDAGPR RDTMADGAWD 180
  181 SPALLVELEN AVRALRDRIE RIEQELPARG NLSSSAPAPA VPTALHSKMD ELEGQLLAKV 240
  241 LALEKERAAL SHGSHQQRQE VEKELDALQG RVAELEHGSS AYSPPDAFKV SIPIRNNYMY 300
  301 ARVRKAVPEL YAFTACMWLR SRSGGSGQGT PFSYSVPGQA NEIVLLEAGL EPMELLINDK 360
  361 VAQLPLSLKD SNWHHICIAW TTRDGLWSAY QDGELRGSGE NLAAWHPIKP HGILILGQEQ 420
  421 DTLGGRFDAT QAFVGDIAQF NLWDHALTPA QVLGIANCTG PLMGNVLPWE DKLVEAFGGA 480
  481 KKAAFDVCKR RAKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle