YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDA4_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLRKAWLLV LLLALTQLLA AASAEDAHED ASDSENPIED DDEEEEDEED EDDLEVKEEN  60
   61 GVWVLNDENF DNFVADKDTV LLEFYAPWCG HCKQFAPEYE KIASTLKDND PPIAVAKIDA 120
  121 TSASMLASKF DVSGYPTIKI LKKGQAVDYD GSRTQEEIVA KVREVSQPDW TPPPEVTLTL 180
  181 TKENFDDVVN NADIILVEFY APWCGHCKKL APEYEKAAKE LSKRSPPIPL AKVDATEQTD 240
  241 LAKRFDVSGY PTLKIFRKGR PFDYNGPREK YGIVDYMVEQ SGPPSKEILT LKQVQEFLKD 300
  301 GDDVVILGVF QGVGDPGYLQ YQDAANTLRE DYKFHHTFST EIAKFLKVSL GKLVLMQPEK 360
  361 FQSKYEPRMH VMDVQGSTEA SAIKDYVVKH DLPLVGHRKT SNDAKRYSKR PLVVVYYSVD 420
  421 FSFDYRTATQ FWRNKVLEVA KDFPEYTFAI ADEEDYATEV KDLGLSESGE DVNAAILDES 480
  481 GKKFAMEPEE FDSDALREFV MAFKKGKLKP VIKSQPVPKN NKGPVRVVVG KTFDAIVMDP 540
  541 KKDVLIEFYA PWCGHCKQLE PVYTSLGKKY KGQKDLVIAK MDATANDITN DRYKVEGFPT 600
  601 IYFAPSGDKK NPIKFEGGNR DLEHLSKFID EHATKRSRTK EEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle