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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|134026300
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHNFYFHVSE VGSQALSVMW YFCDVFGRIW QPPFILFYLS AFWIAPAILH PQCLDFKPPF  60
   61 QPQQELQFCQ MYKNFGCCDY ARDQELMKKY YRVMDNFDYY GYSNCASYVQ DLLCQECSPY 120
  121 AAHLFDAEDP STPLRTIPGL CPDYCAQFHS KCRSFLTLLS DDPRLAELEH DQRKLCQYLE 180
  181 LDDPDYCYPH LLSNEHLNKN LGRTAADSEG CLQLCLEEVA NGLRNPLAMV HANDGTHRFF 240
  241 VAEQVGLVWV YLPDQSKLEK PFLNITKAVL TSPWEGDERG FLGLTFHPRF KYNGKLYVYY 300
  301 SVEVGFDERI RISEFRISST DMNVVDHTSE RIILEIDEPA SNHNGGQLLF ADDGYLYIFT 360
  361 GDGGMAGDPF GKFGNAQNKS ALLGKVLRID VDDNERGPLY RIPADNPFVH EPKARPEVYA 420
  421 YGVRNMWRCS VDRGDPITKE GRGRIFCGDV GQNKYEEVDI VEKGRNYGWR AKEGFSCYDK 480
  481 KLCANSSLDD VLPIYAYPHK MGKSVTGGYV YRGCENPNLN GLYIFGDFMS GRLMSLKENR 540
  541 QTGNWEYNEI CMGIGLTCSF PGLINNYYPY IISFAEDEAG ELYFMSTEIP SATSPTGVVY 600
  601 KIVDPSRRAP PGKCHYEPHS VRVKSNIIPF EPKETLIGVH IPTKQPKLSN TEEPPLVTTK 660
  661 DWLRELLDNF REEDGQITTT PFTPTTPKPV RTSRQRKGRR RKGKHKNGAV RLVGDEEGQR 720
  721 DRGRVEVYAN GEWGTVCDDL WNTKNAVVVC RQLGFLHALK AAKHAEFGEG TGLKIILDDV 780
  781 QCEGTEETLL DCQHAGIGTH NCAHYEDAGV VCGNSVASLQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle