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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: 4F2_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQDTEVDMK DVELNELEPE KQPMNAADGA AAGEKNGLVK IKVAEDEAEA GVKFTGLSKE  60
   61 ELLKVAGSPG WVRTRWALLL LFWLGWLGML AGAVVIIVRA PRCRELPVQR WWHKGALYRI 120
  121 GDLQAFVGPE ARGIAGLKNH LEYLSTLKVK GLVLGPIHKN QKDEVNETDL KQIDPDLGSQ 180
  181 EDFKDLLQSA KKKSIHIILD LTPNYKGQNA WFLPPQADIV ATKMKEALSS WLQDGVDGFQ 240
  241 VRDVGKLANA SLYLAEWQNI TKNFSEDRLL IAGTASSDLQ QIVNILESTS DLLLTSSYLS 300
  301 QPVFTGEHAE LLVIKYLNAT GSRWCSWSVS QAGLLTSFIP AQFLRLYQLL LFTLPGTPVF 360
  361 SYGDELGLQA VALPGQPMEA PFMLWNESSN SQTSSPVSLN MTVKGQNEDP GSLLTQFRRL 420
  421 SDLRGKERSL LHGDFDALSS SSGLFSYVRH WDQNERYLVV LNFQDVGLSA RVGASNLPAG 480
  481 ISLPASANLL LSTDSTRLSR EEGTSLSLEN LSLNPYEGLL LQFPFVA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle