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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149022991
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHTRRKSLP MLSSGPTGRG EPLQMEDSNV EQGAEDVEPG MPESPGHLTG RRKNYPLRKR  60
   61 SLVPEKPKAC KVLLTRLENV AGPRSADEAD ELPPDLPKAP SPTPSSEDAG LVQPRKRRLA 120
  121 SLNAEALNNL LLEREDTSSL AGARRSRGGD PHRSRDRATG SWSFSKKRPR LGDLGEGSRD 180
  181 LSPELAPDEG ARRDGDPAPK RLASLNAAAF LKLSQERELP LRPSRAQAEA DGRSTEPLAP 240
  241 KVLRPKVNGK NCPKVRQGAG SGEATGPPNW QEQPEERWPS APPRGPPIQP SHQAPGKALE 300
  301 NPLRPNLPLL MGGQAALKPE PGRPGEESPA PKQELHQPSF PAPQLAPLPM PGNPADYSGP 360
  361 CGGPELTALG GFYLYCGQDG LQCGSYSPCP MLPEGKLSPV AAPNEGLLMA PSSVPSGVPF 420
  421 QHPPWSASRY CSSEDTGANG YSICGVLPLS LTHIGTTCGG CPYKMPFTAE GCRSLGQLEF 480
  481 PLPEAGHPAS PAHPLLGCPV PSVPPAAEPI PHLQTPISEP QTVARACPQS AKPPSGSKSG 540
  541 LRTGSSCRHT VRSKAARRPS HPKQPRAQRP RPRRRRRRRT NGWVPVGAAC EKAVYVLDEP 600
  601 EPAIRKSYQA VERHGETIRV RDTVLLKSGP RKTSTPYVAK ISALWENPES GELMMSLLWY 660
  661 YRPEHLQGGR SPSMHEPLQN EVFASRHQDQ NSVACIEEKC YVLTFAEYCR FCAMAKRRGE 720
  721 GLPSRKTALV PPSADYSTPP HRTVPEDTDP ELVFLCRHVY DFRHGRILKN PQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle