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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: EFNB1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPGQRWLS KWLVAMVVLT LCRLATPLAK NLEPVSWSSL NPKFLSGKGL VIYPKIGDKL  60
   61 DIICPRAEAG RPYEYYKLYL VRPEQAAACS TVLDPNVLVT CNKPQQEIRF TIKFQEFSPN 120
  121 YMGLEFKKYH DYYITSTSNG SLEGLENREG GVCRTRTMKI VMKVGQDPNA VTPEQLTTSR 180
  181 PSKESDNTVK TATQAPGRGS QGDSDGKHET VNQQEKSGPG AGGSGSGDTD SFFNSKVALF 240
  241 AAVGAGCVIF LLIIIFLTVL LLKLRKRHRK HTQQRAAALS LSTLASPKGD SGTAGTEPSD 300
  301 IIIPLRTTEN NYCPHYEKVS GDYGHPVYIV QEMPPQSPAN IYYKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle