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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CSF1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARGAAGRC PSSTWMGSRL LLVCLLVSRS VAEVSEHCSH MIGNGHLQIL QQLIDSQMET  60
   61 ACLIEYKFVD QEQLDDPVCY LKKAFVLVQV IIEETMRFKD NTPNANATER LQELSMKLNS 120
  121 CFIKDYKEQN EACVQTYKES PLRLLEKIKN FFNETKNFLE KDWNIFSKNC NDSFAKCSSR 180
  181 DVVTKPDCNC LYPKATPSSD LASASPHQPP APSMAPLADL AWDDSQRTEG SSLLPSDLPL 240
  241 RIEDPGSAKQ RPPRSTCQTL ESTEQPNHED PQPHPSAGAP IPGVEDIIES SMGTNWVLEE 300
  301 ASGEASEGFL TQERKFSPSN PVGGSIQAET DRPWARSASS PFPKLTEDQQ PTNITDTPLT 360
  361 EVNPMRPTGQ TLNNTPEKTD GSSTLREDQQ EPRSPHFATL NPQRVGNSAT PYAKLLPPKS 420
  421 HSWGIVLPLG ELEGKKSTRD RRSPAELKGG PASEGAARPV AQSTRDRRSP AELKGGPASE 480
  481 GAARPVARFN SIPLTDTGSS IQDPQTSAFV FWVLGIILVL LAVGGLLFYS WKRRSHRDPR 540
  541 TLDSSVGRPE GSSLAQDEDR QVELPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle