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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15485713, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSARIIWL ILWTVCVAED CKGPPPRENS EILSGSWSEQ LYSEGTQATY KCRPGYRTLG  60
   61 TIVKVCKNGE WVPSNPSRIC RKRPCGHPGD TPFGSFRLAV GSEFEFGAKV VYTCDEGYQL 120
  121 LGEIDYRECD ADGWTNDIPI CEVVKCLPVT ELENGRIVSG AAEPDQEYYF GQVVRFECNS 180
  181 GFKIEGQKEM HCSENGLWSN EKPQCVEISC LPPRVENGDG IYLKPVYKEN ERFQYKCKQG 240
  241 FVYKERGDAV CTGSGWNPQP SCEEMTCLTP YIPNGIYTPH RIKHRIDDEI RYECKNGLYP 300
  301 ATRSPVSKCT ITGWIPAPRC SLKPCDFPQF KHGRLYYEES RRPYFPVPIG KEYSYYCDNG 360
  361 FTTPSQSYWD YLRCTVNGWE PEVPCLRQCI FHYVEYGESL YWQRRYIEGQ SAKVQCHSGY 420
  421 SLPNGQDTIL CTENGWSPPP KCVRIKTCSV SDIEIENGFF SESDYTYALN RKTRYRCKQG 480
  481 YVTNTGEISG IITCLQDGWS PRPSCIKSCD MPVFENAMTK NNNTWFKLND KLDYECHIGY 540
  541 ENEYKHTKGS ITCTYDGWSS TPSCYERECS IPLLHQDLVV FPREVKYKVG DSLSFSCRSG 600
  601 HRVGADLVQC YHFGWSPNFP TCEGQVKSCD QPLEIPNGEI KGTKKVEYSH GDVVEYDCKP 660
  661 RFLLKGPNKI QCVDGKWTTL PICVEYERTC GDLPELEHGS VKLSVPPYHH GDSVEFTCTE 720
  721 TFTMIGHAVV FCISGRWTEL PQCVATDQLE KCKAPKSTGI DAIHPNKNEF NHNFSVSYRC 780
  781 RQKQEYEHSI CINGRWDPEP NCTRNEKRFC PPPPQIPNAQ VIETTVKYLD GEKVSVLCQD 840
  841 GYLTQGPEEM VCKHGRWQSL PRCTEKIPCS QPPKIEHGSI KSPRSSEERD LIESSSYEHG 900
  901 TTFSYVCDDG FRISEENRVT CNMGKWSSLP RCVGIPCGPP PSIPLGIVSH ELESYQYGEE 960
  961 VTYNCSEGFG IDGPAFIKCV GGQWSEPPKC IKTDCDNLPT FEIAKPTEKK KKSYRSGEQV1020
 1021 TFRCPPPYRM DGSDIVTCVN TKWIGQPVCK DNSCVNPPHV PNATILTRHK TKYPSGDKVR1080
 1081 YDCNKPFELF WGSGSDVPKT GFWTEPPKCK DSTGKCGPPP PIDNGDITSL SLPVYAPLSS1140
 1141 VEYQCQNYYL LKGNKIVTCR NGKWSQPPTC LHACVIPEDI MEKHNIVLRW RENAKIYSQS1200
 1201 GENIEFMCKP GYRKFRGSPP FRTKCIEGHI NYPTCV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle