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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SLIT3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGRTGAGA AVRARLALAL ALASILSGPP AAACPTKCTC SAASVDCHGL GLRAVPRGIP  60
   61 RNAERLDLDR NNITRITKMD FTGLKNLRVL HLEDNQVSVI ERGAFQDLKQ LERLRLNKNK 120
  121 LQVLPELLFQ STPKLTRLDL SENQIQGIPR KAFRGVTGVK NLQLDNNHIS CIEDGAFRAL 180
  181 RDLEILTLNN NNISRILVTS FNHMPKIRTL RLHSNHLYCD CHLAWLSDWL RQRRTIGQFT 240
  241 LCMAPVHLRG FSVADVQKKE YVCPGPHSEA PACNANSLSC PSACSCSNNI VDCRGKGLTE 300
  301 IPANLPEGIV EIRLEQNSIK SIPAGAFIQY KKLKRIDISK NQISDIAPDA FQGLKSLTSL 360
  361 VLYGNKITEI PKGLFDGLVS LQLLLLNANK INCLRVNTFQ DLQNLNLLSL YDNKLQTISK 420
  421 GLFAPLQSIQ TLHLAQNPFV CDCHLKWLAD YLQDNPIETS GARCSSPRRL ANKRISQIKS 480
  481 KKFRCSGSED YRNRFSSECF MDLVCPEKCR CEGTIVDCSN QKLSRIPSHL PEYTTDLRLN 540
  541 DNDIAVLEAT GIFKKLPNLR KINLSNNRIK EVREGAFDGA AGVQELMLTG NQLETMHGRM 600
  601 FRGLSGLKTL MLRSNLISCV NNDTFAGLSS VRLLSLYDNR ITTISPGAFT TLVSLSTINL 660
  661 LSNPFNCNCH MAWLGRWLRK RRIVSGNPRC QKPFFLKEIP IQDVAIQDFT CEGNEENSCQ 720
  721 LSPRCPEQCT CVETVVRCSN RGLHTLPKGM PKDVTELYLE GNHLTAVPKE LSTFRQLTLI 780
  781 DLSNNSISML TNHTFSNMSH LSTLILSYNR LRCIPVHAFN GLRSLRVLTL HGNDISSVPE 840
  841 GSFNDLTSLS HLALGINPLH CDCSLRWLSE WIKAGYKEPG IARCSSPESM ADRLLLTTPT 900
  901 HRFQCKGPVD INIVAKCNAC LSSPCKNNGT CSQDPVEQYR CTCPYSYKGK DCTVPINTCV 960
  961 QNPCQHGGTC HLSESHRDGF SCSCPLGFEG QRCEINPDDC EDNDCENSAT CVDGINNYAC1020
 1021 VCPPNYTGEL CDEVIDYCVP EMNLCQHEAK CISLDKGFRC ECVPGYSGKL CETDNDDCVA1080
 1081 HKCRHGAQCV DAVNGYTCIC PQGFSGLFCE HPPPMVLLQT SPCDQYECQN GAQCIVVQQE1140
 1141 PTCRCPPGFA GPRCEKLITV NFVGKDSYVE LASAKVRPQA NISLQVATDK DNGILLYKGD1200
 1201 NDPLALELYQ GHVRLVYDSL SSPPTTVYSV ETVNDGQFHS VELVMLNQTL NLVVDKGAPK1260
 1261 SLGKLQKQPA VGINSPLYLG GIPTSTGLSA LRQGADRPLG GFHGCIHEVR INNELQDFKA1320
 1321 LPPQSLGVSP GCKSCTVCRH GLCRSVEKDS VVCECHPGWT GPLCDQEAQD PCLGHSCSHG1380
 1381 TCVATGNSYV CKCAEGYEGP LCDQKNDSAN ACSAFKCHHG QCHISDRGEP YCLCQPGFSG1440
 1441 NHCEQENPCL GEIVREAIRR QKDYASCATA SKVPIMVCRG GCGSQCCQPI RSKRRKYVFQ1500
 1501 CTDGSSFVEE VERHLECGCR ECS

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