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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|126631266, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVVLALTV ALVASQQMNL VPEFAHDKTY VYKYEALLLG GLPQEGLARA GIKVSSKVLL  60
   61 SAMTENTYLM KLMDPLLYEY AGTWPKDPFV PATKLTSALA AQLQIPIKFE YANGVVGKVF 120
  121 APAGVSPTVM NLYRGILNIL QLNLKTTQNI YELQEAGAQG VCRTHYVINE DPKTNHIIVT 180
  181 KSKDLSHCQE RIMKDVGLAY TESCPECTER VKSLIETATY NYIMKPADNG ALIAEATVEE 240
  241 VYQFSPFNEI HGAAMMEAKQ TLAFVEIEKT PVVPIKADYM PRGSLQYEFA TEILQTPIQL 300
  301 MKISDATAQI VEVLTHLVAN NKDMVHDDAP LKFVQLVQLL RLSTLDKFEA IWAQFKNKPV 360
  361 YRRWLLDALP AVGTPVIIKF IKEKFLAGEF TTPEFIQTLV VALQMVTADL ETIQMTYSLA 420
  421 THEKFTTIPA LREVVMLGYG SLIAKHCVAV PSCPAELLKP IHEITAEAIS KNDIPEITLA 480
  481 LKVMGNAGHP SSLKPIMKLL PGLRTAANAL PIKVQVDAIL ALRNIAKKEP KLVQPIALQL 540
  541 VLDRALHPEV RMVACIVLFE AKPSAALVSS LAGALRIEPN MHVASFAYSH IKSLTRITAP 600
  601 DMASVAGAAN VAIKLMNRKL DRLNYRYSRA FHMDYYHTPL MIGAAGSAYM INDAATILPR 660
  661 AIVAKARTYL AGAAADVIEF GVRTGGIHEA LLKSSAADES VDRITKIKRT LKALANWKAL 720
  721 PTDRPLASAY VKVFGQEVAY VNFDKTIIEE AIPMVSGPKP RALLKEALKA LQEGVAFQYA 780
  781 KPLLAAEVRR ILPTAVGVPM EFSLYTAAVA AASVNVQATI TPALPEKLES MTLDQLKRTD 840
  841 VQFQAEARPS VALQTFAVMG VNTAFIQAAV MARGKIRTIA PGKVAARADI LKGNYKVETL 900
  901 PVELPEHIAS ASFETLAVVR NIEDHSAERS IPLVPELSLQ NSQTSSAGDL STEMSSAASV 960
  961 RASAPFDRTL CYSCPYIQVK GCVEVHSYNA AFIKNSTLFY IIGQHSAHVA VARAEGPSVE1020
 1021 RLEFEVQVGP RAAERLVKQM NIIDDDTPEG QAFLLKLREI LDTEAKNAPV SSESSSSRNS1080
 1081 RSSSSRSHST SSSSSSRSSS SSSSSMSSSR LSKTATIIEP FKKFHKDRYL AHHSATKDTS1140
 1141 SGSAAASFEQ TQKQNRFLGN DLPPVFAIIA RAVRDDQKLL GYQLAAYFDK PTARVQLIAS1200
 1201 SIAENDNRKI CADGALLSKH KVTGKFSWGA ECKQYAVFAK AEAGVLGEFP AARLEVEWER1260
 1261 LPIIVTTYAK KLCKHILKAA YDTGFRFERA TNSEKEIELT AALPSQKSFD FIARIPEITM1320
 1321 SKREIPLPVA VPINPDGTFS IHTYEDFLSW IQKYIKDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle