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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IPI:IPI00205684....
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSCQISCKSR RGGGGGGGGG FRGFSSGSAV VSGGSRRSTS GFSCLSRHGG GRGGSGGGGF  60
   61 GSQSLVGLGG YKSISSSVAG YGGGFGGRSY GGFGGGSGFG GSGGFGGGSG FGGGRGFGGG 120
  121 SGFGGGSGFG GGSGFGGGSG FGGGGFGGGR FGGGPGGFGG PGGFPGGGIH EVSVNQSLLQ 180
  181 PLDVKVDPEI QNVKSQEREQ IKTLNNKFAS FIDTVRFLEQ QNQVLHTKWE LLQQLDVGTR 240
  241 TTNLDPVFQA YIGILKKQVD RLTAERNSQD SELNNMQDLV EDFKKKYEDE INKRTSAEND 300
  301 FVTIKKDVDS CYMDKTELQA KMEMLTQEVD FLRTLYDTEL SQLQQNVTDT NVILSMDNNR 360
  361 NLDLDSIIAE VQSQYEIIAH KSKAESEELY HSKAKLQVTA VKHGDSLKEI KMEISELNRT 420
  421 IQRLQGEISH VKKQCKGVQD SIADAEQRGE HAIKDARGKL TDLEEALQQG RENLARLLRD 480
  481 YQELMNVKLA LDVEIATYRK LLEGEECRMS GDFSDNVSVS VTSSTISSSV ASKAGFGSGG 540
  541 QSSGGRGSYG GRGGGSTYGS GGRSSGVRGS GSGSGGGGYS SGGGSRGGSG GGGYSTGGGS 600
  601 RGGSSSGGGG YSSGGGSRGD SSSGGGSRGG SGGGSRGGSG GGGYSSGGGS RGGSSSGGAV 660
  661 SGSERGGSGS GEGCGSGVTF SFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle