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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYAM2_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNASCFLSAL TFVLLIGKSI AWYYNASSEL MTYDEASAYC QRDYTHLVAI QNKEEINYLN  60
   61 STLRYSPSYY WIGIRKVNNV WIWVGTQKPL TEEAKNWAPG EPNNKQRNED CVEIYIQRPK 120
  121 DSGMWNDERC DKKKLALCYT ASCTNTSCSG HGECVETINS YTCKCHPGFL GPKCDQVVTC 180
  181 QEQEYPDHGS LNCTHPFGLF SYNSSCSFSC ERGYVPSSME TTVRCTSSGE WSAPAPACHV 240
  241 VECKALTQPA HGVRKCSSNP GSYPWNTTCT FDCEEGYRRV GAQNLQCTSS GVWDNEKPSC 300
  301 KAVTCDAIPR PQNGSVSCSN STAGALAFKS SCNFTCEHSF TLQGPAQVEC SAQGQWTPQI 360
  361 PVCKASQCEA LSAPQRGHMK CLPSASAPFQ SGSSCKFSCD EGFELKGSRR LQCGPRGEWD 420
  421 SEKPTCAGVQ CSSLDLPGKM NMSCSGPAVF GTVCEFTCPE GWTLNGSSIL TCGATGRWSA 480
  481 MLPTCEAPAN PPRPLVVALS VAATSLLTLS SLIYVLKRFF WKKAKKFVPA SSCQSLQSFE 540
  541 NYQGPSYII

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle