YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15027543
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVDGTEVTCQ IGSSQKSVTC DVGYPALKSE QQVTFTINLD FNLQNLQNQA AINFQAFSES  60
   61 QETNKADNSV SLIVPLLYDA ELHLTRSTNI NFYEISSDEN APSVINSVED IGPEFIFSLK 120
  121 ITAGSAPVSM ASVTIHIPLH TKEKNPLLYL TGIQTDKAGD ISCRAEINPL NLPHTASPVS 180
  181 FKSENFRHMK ELDCKTTSCS NVSCWLKDLH MKAEYFINVT TRVWNRTFAA STFQTVQLTA 240
  241 AAEIDTHNPQ LFVIEENAVT IPLMIMKPTE KAEVPTGVII GSIIAGILLL LAMVAGLWKL 300
  301 GFFKRQYKKM GQNPDETDET TELNS

Type	Start	End	Confidence
Non-Cytoplasmic	1	277	0.80
Transmembrane Helix	278	301	0.89
Cytoplasmic	302	325	0.82