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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14279176
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRCGGLAGA FKQKLVPLVR SVCVQRPKQR NRLPVVQCHL LGFPSRSLAS AGASGKDGSN  60
   61 LVYFLIVGAT VTGAGIYYAY KTIKEDQKRY NERIMGLGLS PEEKQRRAIA SAAEGGSVPP 120
  121 IRVPSHVPFL LIGGGTAAFA AARSIRARDP GARVLIVSED PELPYMRPPL SKELWFSDDP 180
  181 NVTKTLQFRQ WNGKERSIYF QPPSFYVSAQ DLPHIENGGV AVLTGKKVVH LDVRGNMVKL 240
  241 NDGSQITFEK CLIATGGTPR SLSAIDRAGA EVKSRTTLFR KIGDFRALEK ISREVKSITV 300
  301 IGGGFLGSEL ACALGRKSQA SGIEVIQLFP EKGNMGKILP EYLSNWTMEK VKREGVKVMP 360
  361 NAIVQSVGVS GGKLLIKLKD GRKVESDHIV TAVGLEPNVE LAKTGGLEID SDFGGFRVNA 420
  421 ELQARSNIWV AGDAACFYDI KLGRRRVEHH DHAVVSGRLA GENMTGAAKP YWHQSMFWSD 480
  481 LGPDVGYEAI GLVDSSLPTV GVFAKATAQD NPKSATEQSG TGIRSESETE SEASEITIPP 540
  541 SDPAVPQVPV EGEDYGKGVI FYLRDKVVVG IVLWNVFNRM PIARKIIKDG EQHEDLNEVA 600
  601 KLFNIHED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle