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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14582574, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLLVPLF LRPLGAGGAQ TPNATSEGCQ IIHPPWEGGI RYRGLTRDQV KAINFLPVDY  60
   61 EIEYVCRGER EVVGPKVRKC LANGSWTDMD TPSRCVRICS KSYLTLENGK VFLTGGDLPA 120
  121 LDGARVEFRC DPDFHLVGSS RSVCSQGQWS TPKPHCQERR AVYIGALFPM SGGWPGGQAC 180
  181 QPAVEMALED VNSRRDILPD YELKLIHHDS KCDPGQATKY LYELLYNDPI KIILMPGCSS 240
  241 VSTLVAEAAR MWNLIVLSYG SSSPALSNRQ RFPTFFRTHP SATLHNPTRV KLFEKWGWKK 300
  301 IATIQQTTEV FTSTLDDLEE RVKEAGIEIT FRQSFFSDPA VPVKNLKRQD ARIIVGLFYE 360
  361 TEARKVFCEV YKERLFGKKY VWFLIGWYAD NWFKTYDPSI NCTVEEMTEA VEGHITTEIV 420
  421 MLNPANTRSI SNMTSQEFVE KLTKRLKRHP EETGGFQEAP LAYDAIWALA LALNKTSGGG 480
  481 GRSGVRLEDF NYNNQTITDQ IYRAMNSSSF EGVSGHVVFD ASGSRMAWTL IEQLQGGSYK 540
  541 KIGYYDSTKD DLSWSKTDKW IGGSPPADQT LVIKTFRFLS QKLFISVSVL SSLGIVLAVV 600
  601 CLSFNIYNSH VRYIQNSQPN LNNLTAVGCS LALAAVFPLG LDGYHIGRSQ FPFVCQARLW 660
  661 LLGLGFSLGY GSMFTKIWWV HTVFTKKEEK KEWRKTLEPW KLYATVGLLV GMDVLTLAIW 720
  721 QIVDPLHRTI ETFAKEEPKE DIDVSILPQL EHCSSKKMNT WLGELWSFAV SSDVQRRATV 780
  781 GGDSPICVWP APESIFYGYK GLLLLLGIFL AYETKSVSTE KINDHRAVGM AIYNVAVLCL 840
  841 ITAPVTMILS SQQDAAFAFA SLAIVFSSYI TLVVLFVPKM RRLITRGEWQ SETQDTMKTG 900
  901 SSTNNNEEEK SRLLEKENRE LEKIIAEKEE RVSELRHQLQ SRQQLRSRRH PPTPPDPSGG 960
  961 LPRGPSEPPD RLSCDGSRVH LLYK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle