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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AOC1_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLAFGWAAV ILVLQTVDTA SAVRTPYDKA RVFADLSPQE IKAVHSFLMN REELGLQPSK  60
   61 EPTLAKNSVF LIEMLLPKKK HVLKFLDEGR KGPNREARAV IFFGAQDYPN VTEFAVGPLP 120
  121 RPYYIRALSP RPGHHLSWSS RPISTAEYDL LYHTLKRATM PLHQFFLDTT GFSFLGCDDR 180
  181 CLTFTDVAPR GVASGQRRSW FIVQRYVEGY FLHPTGLEIL LDHGSTDVQD WRVEQLWYNG 240
  241 KFYNNPEELA RKYAVGEVDT VVLEDPLPNG TEKPPLFSSY KPRGEFHTPV NVAGPHVVQP 300
  301 SGPRYKLEGN TVLYGGWSFS YRLRSSSGLQ IFNVLFGGER VAYEVSVQEA VALYGGHTPA 360
  361 GMQTKYIDVG WGLGSVTHEL APGIDCPETA TFLDAFHYYD SDGPVHYPHA LCLFEMPTGV 420
  421 PLRRHFNSNF KGGFNFYAGL KGYVLVLRTT STVYNYDYIW DFIFYSNGVM EAKMHATGYV 480
  481 HATFYTPEGL RHGTRLQTHL LGNIHTHLVH YRVDMDVAGT KNSFQTLTMK LENLTNPWSP 540
  541 SHSLVQPTLE QTQYSQEHQA AFRFGQTLPK YLLFSSPQKN CWGHRRSYRL QIHSMAEQVL 600
  601 PPGWQEERAV TWARYPLAVT KYRESERYSS SLYNQNDPWD PPVVFEEFLR NNENIEDEDL 660
  661 VAWVTVGFLH IPHSEDVPNT ATPGNSVGFL LRPFNFFPED PSLASRDTVI VWPQDKGLNR 720
  721 VQRWIPEDRR CLVSPPFSYN GTYKPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle