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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CGT_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSYTPYFML LWSAVGIARA AKIIIVPPIM FESHLYIFKT LASALHERGH HTVFLLSEGR  60
   61 DIDPSNHYSL QRYPGIFNST TSDAFLQSKM RNIFSGRLTA VELVDILDHY TKNCDMMVGN 120
  121 QALIQGLKKE KFDLLLVDPN DMCGFVIAHL LGVKYAVFST GLWYPAEVGA PAPLAYVPEF 180
  181 NSLLTDRMNF LERMKNTGVY LISRMGVSFL VLPKYERIMQ KYNLLPAKSM YDLVHGSSLW 240
  241 MLCTDVALEF PRPTLPNVVY VGGILTKPAS PLPEDLQRWV DGAQEHGFVL VSFGAGVKYL 300
  301 SEDIANKLAG ALGRLPQKVI WRFSGTKPKN LGNNTKLIEW LPQNDLLGHS NIRAFLSHGG 360
  361 LNSIFETMYH GVPVVGIPLF GDHYDTMTRV QAKGMGILLE WNTVTEGELY DALVKVINNP 420
  421 SYRQRAQKLS EIHKDQPGHP VNRTTYWIDY ILRHDGAHHL RSAVHQISFC QYFLLDIAFV 480
  481 LLLGAVALYF IVSYVTKFIY RKVKSLCSRS THSTVNGHYQ NGILNGRYKG NGHIKHEKKV 540
  541 K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle