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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13929176, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGTPPPSP SGPPPPPAPQ PQARARLNAT TSLEQDKIEP PRAPRPQPDS SAGRSAGEAT  60
   61 TPEPRAPHAS SREGTDKAGP MKADVEIPFE EILEKAKAGD PKAQTEVGKH YLRLANDADE 120
  121 ELNSCSAVAW LILAAKQGRR EAVKLLRRCL ADRKGITSEN EAEVKQLSSE TDLERAVRKA 180
  181 ALVMYWKLNP KKKKQVAVSE LLENVGQVNE QDGGAQPGPV PKSLQKQRRM LERLVSSESK 240
  241 NYIALDDFVE LTKKYAKGII PNNLFLQDED EDEDELSGKS PEDLPLRQKV VKYPLHAIME 300
  301 IKEYLIDVAS KAGMHWLSTI VPTHHINALI FFFIISNLTI DFFAFFIPLV VFYLSFVSMV 360
  361 ICTLKVFQDS KAWENFRTLT DLLLRFEPNL DVEQAEVNFG WNHLEPYIHF LLSVVFVIFS 420
  421 FPLASKDCIP CSELAVVSAF FTVTSYMSLS SSAEPYTRRA LVTEVAAGLL SLLPTMPVDW 480
  481 PFLKALGQTF FTVPIGHFII LNVSLPCLLY VYLFYLFFRM AQLRNFKGTY CYLVPYLVCF 540
  541 MWCELSVVIL LQSTGLGLVR ASIGYFLFLF ALPILVAGLA LMGTVQFARW FLSLDLTKIM 600
  601 VTTVICSVPL LFRWWTKANF SVVGMVKSLT RSSIVKLILV WLTAILLFCW FYVYRSEGMK 660
  661 VYNSTLTWQQ YGFLCGPRAW KETNMARTQI LCSHLEGHRV TWTGRFKYVR VTEIDNSAES 720
  721 AINMLPFFLG DWMRCLYGEA YPSCSSGNTS TAEEELCRLK QLAKHPCHIK KFDRYKFEIT 780
  781 VGMPFGTNGN RGHEEDDITK DIVLRASSEF KDVLLNLRQG SLIEFSTILE GRLGSKWPVF 840
  841 ELKAISCLNC MTQLSPARRH VKIEQDWRST VHGALKFAFD FFFFPFLSAA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle