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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6970046
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLLLSALL FLHSSLAWTR EKHYYIGITE AVWDYASGSE EKELISVDTE QSNFYLRNGP  60
   61 DRIGRKYKKA LYSEYTDGTF TKTIDKPAWL GLLGPVIKAE VGDKVSVHVK NFASRPYTFH 120
  121 AHGVTYTKAN EGAIYPDNTT DFQRADDKLF PGQQYLYVLR ANEPSPGEGD SNCVTRIYHS 180
  181 HVDAPKDIAS GLIGPLILCK KGSLHKEKEE NIDQEFVLMF SVVDENLSWY LEDNIKTFCS 240
  241 EPEKVDKDNE DFQESNRMYS INGYTFGSLP GLSMCAEDRV KWYLFGMGNE VDVHSELFHG 300
  301 QALTSKNYHT DIINLFPATL IDVSMVAQNP GVWMLSCQNL NHLKAGLQAF FQVRDCNKPS 360
  361 PDDDIQDRHV RHYYIAAEET IWDYAPSGTD TFTGENLTSL GSDSRVFFEQ GATRIGGSYK 420
  421 KLVYREYTDD SFTNRKQRGP DEEHLGILGP VIWAEVGDII RVTFHNKGQF PLSIQPMGVR 480
  481 FTKENEGTYY GPDGRSSKQA SHVAPKETFT YEWTVPKEMG PTYADPVCLS KMYYSGVDLT 540
  541 KDIFTGLIGP MKICKKGSLL ADGRQKDVDK EFYLFATVFD ENESLLLDDN IRMFTTAPEN 600
  601 VDKEDEDFQE SNKMHSMNGF MYGNLPGLNM CLGESIVWYL FSAGNEADVH GIYFSGNTYL 660
  661 SKGERRDTAN LFPHKSLTLL MTPDTEGSFD VECLTTDHYT GGMKQKYTVN QCKGQFEDVT 720
  721 LYQGERTYYI AAVEVEWDYS PSRDWEMELH HLQEQNVSNA FLDKEEFFIG SKYKKVVYRE 780
  781 FTDSTFREQV KRRAEEEHLG ILGPLIHADV GDKVKVAFKN MASRPYSIHA HGVKTKSSTV 840
  841 TPTLPGEVRT YIWQIPERSG AGTEDSPCIP WAYYSTVDRV KDLYSGLIGP LIVCRKSYVK 900
  901 VFNPKKKMEY SLLFLVFDEN ESWYLDDNIN TYSDHPEKVN KDNEEFIESN KMHAINGKMF 960
  961 GNLQGLTMHV GDEVNWYVMA MGNEIDLHTV HFHGHSFQYK HRGIHSSDVF DLFPGTYQTL1020
 1021 EMFPQTPGTW LLHCHVTDHI HAGMVTTYTV LPNQASSQSY RMTWNILYTL LISMTTLFQI1080
 1081 STKE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle