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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GLT11_RAT
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSVTIRYFC YGCLFTSATW TVLLFIYFNF SEVTQPLRNV PIKGSGPHGP FPKKFYPRFT  60
   61 RGPGRVLEPQ FKANRMDDLM NNNIEDPDKG LSKSSSELGM IFNERDQELR DLGYQKHAFN 120
  121 MLISNRLGYH RDVPDTRNAE CRGKSYPTDL PTASVVICFY NEAFSALLRT VHSVVDRTPA 180
  181 HLLHEIILVD DSSDFDDLKG ELDEYIQRYL PAKVKVIRNM KREGLIRGRM IGAAHATGEV 240
  241 LVFLDSHCEV NVMWLQPLLA IILEDPHTVV CPVIDIISAD TLAYSSSPVV RGGFNWGLHF 300
  301 KWDLVPVSDL GGADSATAPI RSPTMAGGLF AMNRQYFNDL GQYDSGMDIW GGENLEISFR 360
  361 IWMCGGKLFI IPCSRVGHIF RKRRPYGSPE GQDTMTHNSL RLAHVWLDEY KEQYFSLRPD 420
  421 LKTKSFGNIS ERVELRKKLG CQSFKWYLDN VYPEMQVSGP KARLQQPVFI NRGPKRPRVL 480
  481 LRGRLYHLQT NKCLVAQGRS SQKGGLVLLK ACDYGDPTQV WIYNEEHELI LNNLLCLDMS 540
  541 ETRSSDPPRL MKCHGSGGSQ QWTFGKNNRL YQVSVGQCLR VVDQMDQKGY VGMAICDGSS 600
  601 SQQWRLEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle