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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62752958
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERKEGRGK GKGKKKDRGS RGKPGPAEGD PSPALPPRLK EMKSQESAAG SKLVLRCETS  60
   61 SEYSSLRFKW FKNGNELNRK NKPENIKIQK KPGKSELRIN KASLADSGEY MCKVISKLGN 120
  121 DSASANITIV ESNEFITGMP ASTETAYVSS ESPIRISVST EGANTSSSTS TSTTGTSHLI 180
  181 KCAEKEKTFC VNGGECFTVK DLSNPSRYLC KCPNEFTGDR CQNYVMASFY KHLGIEFMEA 240
  241 EELYQKRVLT ITGICIALLV VGIMCVVAYC KTKKQRQKLH DRLRQSLRSE RSNLVNIANG 300
  301 PHHPNPPPEN VQLVNQYVSK NVISSEHIVE REVETSFSTS HYTSTAHHST TVTQTPSHSW 360
  361 SNGHTESVIS ESNSVIMMSS VENSRHSSPA GGPRGRLHGL GGPRDNSFLR HARETPDSYR 420
  421 DSPHSERYVS AMTTPARMSP VDFHTPSSPK SPPSEMSPPV SSMTVSMPSV AVSPFVEEER 480
  481 PLLLVTPPRL REKKYDHHPQ QLNSFHHNPA HQSTSLPPSP LRIVEDEEYE TTQEYESVQE 540
  541 PVKKVTNSRR AKRTKPNGHI ANRLEMDSNT SSVSSNSESE TEDERVGEDT PFLGIQNPLA 600
  601 ASLEVAPAFR LAESRTNPAG RFSTQEELQA RLSSVIANQD PIAV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle