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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UD12_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.83
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTGLCAPLR GLSGLLLLLC ALPWAEGGKV LVFPMEGSHW LSMRDVVREL HARGHQAVVL  60
   61 APEVTVHMKG EDFFTLQTYA FPYTKEEYQR EILGNAKKGF EPQHFVKTFF ETMASIKKFF 120
  121 DLYANSCAAL LHNKTLIQQL NSSSFDVVLT DPVFPCGALL AKYLQIPAVF FLRSVPCGID 180
  181 YEATQCPKPS SYIPNLLTML SDHMTFLQRV KNMLYPLTLK YICHLSITPY ESLASELLQR 240
  241 EMSLVEVLSH ASVWLFRGDF VFDYPRPIMP NMVFIGGINC VIKKPLSQEF EAYVNASGEH 300
  301 GIVVFSLGSM VSEIPEKKAM EIAEALGRIP QTLLWRYTGT RPSNLAKNTI LVKWLPQNDL 360
  361 LGHPKARAFI THSGSHGIYE GICNGVPMVM MPLFGDQMDN AKRMETRGAG VTLNVLEMTA 420
  421 DDLENALKTV INNKSYKENI MRLSSLHKDR PIEPLDLAVF WVEYVMRHKG APHLRPAAHD 480
  481 LTWYQYHSLD VIGFLLAIVL TVVFIVYKSC AYGCRKCFGG KGRVKKSHKS KTH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle