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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67678200, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNNRGRKAG GGSQDFGAGL KYNSRLENMN GFEEGVEFLP VNNAKQVEKR GPRRWVVMVA  60
   61 VVFSFLLLSL MAGLLVWHFH YRNVRIQKVF NGHLRITNEN FLDAYENSTS TEFISLASQV 120
  121 KEALKLMYSE VPVLGPYHKK STVTAFSEGS VIAYYWSEFS IPPHLEEEVD RAMAVERVVT 180
  181 LPPRARALKS FVLTSVVAFP IDPRMLQRTQ DNSCSFALHA RGRTVTRFTT PGFPNSPYPA 240
  241 HARCQWVLRG DADSVLSLTF RSFDVAPCDG HDSDLVTVYD SLSPMEPHAV VRLCGTFSPS 300
  301 YNLTFLSSQN VFLVTLITNT DRRHPGFEAT FFQLPKMSSC GGLLSEAQGT FSSPYYPGHY 360
  361 PPNINCTWNI KVPNNRNVKV RFKLFYLVDP NIPVGSCTKD YVEINGEKFC GERSQFVVSS 420
  421 NSSKITVHFH SDHSYTDTGF LAEYLSYDSN DPCPGMFMCK TGRCIRKDLR CDGWADCPDY 480
  481 SDERHCRCNA THQFMCKNQF CKPLFWVCDS VNDCGDGSDE EGCSCPAGSF KCSNGKCLPQ 540
  541 SQQCNGKDDC GDGSDEASCD NVNAVSCTKY TYRCQNGLCL NKGNPECDGK KDCSDGSDEK 600
  601 NCDCGLRSFT KQARVVGGTN ADEGEWPWQV SLHALGQGHL CGASLISPDW LVSAAHCFQD 660
  661 ETIFKYSDHT MWTAFLGLLD QSKRSASGVQ EHKLKRIITH PSFNDFTFDY DIALLELEKP 720
  721 AEYSTVVRPI CLPDNTHVFP AGKAIWVTGW GHTKEGGTGA LILQKGEIRV INQTTCEELL 780
  781 PQQITPRMMC VGFLSGGVDS CQGDSGGPLS SVEKDGRIFQ AGVVSWGEGC AQRNKPGVYT 840
  841 RIPEVRDWIK EQTGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle