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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: A1I3_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKDREAQLC LFSALLAFLP FASLLNGNSK YMVLVPSQLY TETPEKICLH LYHLNETVTV  60
   61 TASLISQRGT RKLFDELVVD KDLFHCVSFT IPRLPSSEEE ESLDINIEGA KHKFSERRVV 120
  121 LVKNKESVVF VQTDKPMYKP GQSVKFRVVS MDKNLHPLNE LFPLAYIEDP KMNRIMQWQD 180
  181 VKTENGLKQL SFSLSAEPIQ GPYKIVILKQ SGVKEEHSFT VMEFVLPRFG VDVKVPNAIS 240
  241 VYDEIINVTA CATYTYGKPV PGHVKISLCH GNPTFSSETK SGCKEEDSRL DNNGCSTQEV 300
  301 NITEFQLKEN YLKMHQAFHV NATVTEEGTG SEFSGSGRIE VERTRNKFLF LKADSHFRHG 360
  361 IPFFVKVRLV DIKGDPIPNE QVLIKARDAG YTNATTTDQH GLAKFSIDTN GISDYSLNIK 420
  421 VYHKEESSCI HSSCTAERHA EAHHTAYAVY SLSKSYIYLD TEAGVLPCNQ IHTVQAHFIL 480
  481 KGQVLGVLQQ IVFHYLVMAQ GSILQTGNHT HQVEPGESQV QGNFALEIPV EFSMVPVAKM 540
  541 LIYTILPDGE VIADSVKFQV EKCLRNKVHL SFSPSQSLPA SQTHMRVTAS PQSLCGLRAV 600
  601 DQSVLLQKPE AELSPSLIYD LPGMQDSNFI ASSNDPFEDE DYCLMYQPIA REKDVYRYVR 660
  661 ETGLMAFTNL KIKLPTYCNT DYDMVPLAVP AVALDSSTDR GMYESLPVVA VKSPLPQEPP 720
  721 RKDPPPKDPV IETIRNYFPE TWIWDLVTVN SSGVTELEMT VPDTITEWKA GALCLSNDTG 780
  781 LGLSSVASFQ AFQPFFVELT MPYSVIRGEA FTLKATVLNY LPTSLPMAVL LEASPDFTAV 840
  841 PVENNQDSYC LGANGRHTSS WLVTPKSLGN VNFSVSAEAR QSPGPCGSEV ATVPETGRKD 900
  901 TVVKVLIVEP EGIKKEHTFS SLLCASDAEL SETLSLLLPP TVVKDSARAH FSVMGDILSS 960
  961 AIKNTQNLIQ MPYGCGEQNM VLFAPNIYVL KYLNETQQLT EKIKSKALGY LRAGYQRELN1020
 1021 YKHKDGSYSA FGDHNGQGQG NTWLTAFVLK SFAQARAFIF IDESHITDAF TWLSKQQKDS1080
 1081 GCFRSSGSLL NNAMKGGVDD EITLSAYITM ALLESSLPDT DPVVSKALSC LESSWENIEQ1140
 1141 GGNGSFVYTK ALMAYAFALA GNQEKRNEIL KSLDKEAIKE DNSIHWERPQ KPTKSEGYLY1200
 1201 TPQASSAEVE MSAYVVLARL TAQPAPSPED LALSMGTIKW LTKQQNSYGG FSSTQDTVVA1260
 1261 LDALSKYGAA TFSKSQKTPS VTVQSSGSFS QKFQVDKSNR LLLQQVSLPY IPGNYTVSVS1320
 1321 GEGCVYAQTT LRYNVPLEKQ QPAFALKVQT VPLTCNNPKG QNSFQISLEI SYMGSRPASN1380
 1381 MVIADVKMLS GFIPLKPTVK KLERLGHVSR TEVTTNNVLL YLDQVTNQTL SFSFIIQQDI1440
 1441 PVKNLQPAIV KVYDYYETDE VAFAEYSSPC SSDDQNV

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