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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: B3AT_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDMQDHEKV LEIPDRDSEE ELEHVIEQIA YRDLDIPVTE MQESEALPTE QTATDYIPTS  60
   61 TSTSHPSSSQ VYVELQELMM DQRNQELQWV EAAHWIGLEE NLREDGVWGR PHLSYLTFWS 120
  121 LLELQKVFSK GTFLLDLAET SLAGVANKLL DSFIYEDQIR PQDRDELLRA LLLKRSHAED 180
  181 LKDLEGVKPA VLTRSGAPSE PLLPHQPSLE TKLYCAQAEG GSEEPSPSGI LKIPPNSETT 240
  241 LVLVGRASFL VKPVLGFVRL KEAVPLEDLV LPEPVSFLLV LLGPEAPHID YTQLGRAAAT 300
  301 LMTERVFRVT ASLAQSRGEL LSSLDSFLDC SLVLPPTEAP SEKALLNLVP VQKELLRKRY 360
  361 LPRPAKPDPN LYEALDGGKE GPGDEDDPLR RTGRIFGGLI RDIRRRYPYY LSDITDALSP 420
  421 QVLAAVIFIY FAALSPAVTF GGLLGEKTRN LMGVSELLIS TAVQGILFAL LGAQPLLVLG 480
  481 FSGPLLVFEE AFYSFCESNN LEYIVGRAWI GFWLILLVVL VVAFEGSFLV QYISRYTQEI 540
  541 FSFLISLIFI YETFSKLIKI FQDYPLQESY APVVMKPKPQ GPVPNTALLS LVLMVGTFLL 600
  601 AMMLRKFKNS TYFPGKLRRV IGDFGVPISI LIMVLVDTFI KNTYTQKLSV PDGLKVSNSS 660
  661 ARGWVIHPLG LYNHFPKWMM FASVLPALLV FILIFLESQI TTLIVSKPER KMIKGSGFHL 720
  721 DLLLVVGMGG VAALFGMPWL SATTVRSVTH ANALTVMGKA SGPGAAAQIQ EVKEQRISGL 780
  781 LVSVLVGLSI LMEPILSRIP LAVLFGIFLY MGITSLSGIQ LFDRILLLFK PPKYHPDVPF 840
  841 VKRVKTWRMH LFTGIQIICL AVLWVVKSTP ASLALPFVLI LTVPLRRLLL PLIFRELELQ 900
  901 CLDGDDAKVT FDEAEGLDEY DEVPMPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle