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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109476490, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNISENVLST GSSLASQVHA AAVNGDKGAL QRLIVGNSAL KDKEDQFGRT PLMYCVLADR  60
   61 LDCADALLKA GADVNKTDHS RRTALHLAAQ KGNYRFMKLL LTRRANWMQK DLEEMTPLHL 120
  121 STRHRSPKCL ALLLKFMAPG EVDTQDKNKQ TALHWSAYYN NPEHAKLLIK HDSNIGIPDV 180
  181 EGKIPLHWAA NHKDASAVHT VRCILDAAPT ESLLNWQDYE GRTPLHFAVA DGNLTVVDVL 240
  241 TSYESCNITS YDNLFRTPLH WAALLGHAQI VHLLLERNKS GTVPSDSQGA TPLHYAAQSN 300
  301 FAETVKVFLT HPSVRDDSDL EGRTSFMWAA GKGSDDVLRT MLSLKSDIDI NMADKYGGTA 360
  361 LHAAALSGHV STVKLLLDND AQVDATDVMK HTPLFRACEM GHRDVIQTLI KGGARVDLVD 420
  421 QDGHSLLHWA ALGGNADVCQ ILIENKINPN VQDYAGRTPL QCAAYGGYIN CMAVLMENNA 480
  481 DPNIQDKEGR TALHWSCNNG YLDAIKLLLD FAAFPNQMEN NEERYTPLDY ALLGERHEVI 540
  541 QFMLEHGALS IAAIQDIAAF KIQAVYKGYK VRKAFRDRKN LLMKHEQLRK DAAAKKREEE 600
  601 NKRKEAEQKG QPDTDPPRPQ VLPCPPSPQN EPSRQSAAPS KQPPASHTVQ SPDPEQGRPA 660
  661 GQCPGRASHR DCSSDLQGTA SRKPSESPRE HCRGASAGVH PRSCEDGDSY RHQGTSSAEK 720
  721 CRGETSGEHQ RCEQGPSRAR QPVSTGSAGP AEKGEDSSPA ITSASQRDRP RKPSKRQDGA 780
  781 PRSRGASQKR RTHQLRDRCS PAGSSRPGSA KAEVARADQS SVHHDTPRNK VTQDKLVGGV 840
  841 SSDVPLSTEE LGSGCQKLYE DLCASPENNV AHGPRPGQSV NIHLLPVEQR LLIIQRERSR 900
  901 KELFRRKNKA AAVIQRAWRS YQLRKHLSRL LHLKQLGARD VLRCTQLCAA LLLQVWRKEL 960
  961 ELKFPKSISV SRTSKSPSKG MSAAKSARHS VLRQIYGCSQ EGKVHHPIRS PKVPPVLHLS1020
 1021 SVNSLQSIHL DSSGRSKKFS YNLQPASQSK NKPKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle