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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149062384, gi...
Protein type: Transmembrane
Type Confidence: 0.86
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRDPEAASP GAPTRDVLLV SAIITVSLSV TIVLCGLCHW CQRKLGKRYK NSLETVGTPD  60
   61 SGRGRGEKKA INFEDSTLST ATTLESIPSS AGEPKCQRPR TLMRQQSLQQ PLSQNQRGRQ 120
  121 PSQPTTSQSL GQLQAHAASA PGSNPRAYGR GQARQGTSAG SKYRAAGGRS RSNPGSWDHV 180
  181 VGQIRNRGLD MKSFLEGRMV VLSLVLGLSE QDDFANIPDL QNPGTQQNQN AQGDKRLPAG 240
  241 GKAVNTAPVP GQTPHDESDR RTEPRSSVSD LVNSLTSEML MLSPGSEEDE AHEGCSRENL 300
  301 GRIQFSVGYN FQESTLTVKV MKAQELPAKD FSGTSDPFVK IYLLPDKKHK LETKVKRKNL 360
  361 NPHWNETFLF EGFPYEKVVQ RILYLQVLDY DRFSRNDPIG EVSIPLNKVD LTQMQTFWKD 420
  421 LKPCSDGSGS RGELLLSLCY NPSANSIIVN IIKARNLKAM DIGGTSDPYV KVWLMYKDKR 480
  481 VEKKKTVTKK RNLNPIFNES FAFDIPTEKL RETTIIITVM DKDKLSRNDV IGKIYLSWKS 540
  541 GPGEVKHWKD MIARPRQPVA QWHQLKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle