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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34932038, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARAAPLLAV LATLLTAAAA GGDAPPGKIA VIGAGIGGSA VAHFLQQHFG PRVQIVVYEK  60
   61 GTVGGRLATI SVNKQNYESG AASFHSLSLH MQDFVKLLGL RQRREVVGRS AIFGGEHFVL 120
  121 EETDWYLLNL FRLWWYYGIS FLRLQMWVEE VMEKFMRIYK YQAHGYAFSG TEELLYSLGE 180
  181 ATFVNMTQRS VAESLLQVGV TQRFIDDVVS AVLRASYGQS ASMPAFAGAM SLAGAQGNLW 240
  241 SVEGGNKLVC SGLLKLAKAT VIHATVTSVT LHSTEGKALY QVGYETDKGN SSDFYDIVVI 300
  301 ATPLHLDNSS SNITFEGFTP PIDDIQGSFQ PTVVSLVHGY LNSSYFGFPD PKLFPFANIL 360
  361 TTDFPSFFCS LDNICPVNIS ASFRRKQPQE AAVWRVQSPK PLFRTELKTL FRSYYSVQTA 420
  421 EWQAHPLYGS RRTLPKFALH DQLFYLNALE WAASSVEVAA VAAKNVALLA YNRWYQDLDK 480
  481 IDQKDLIHKV KTEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle