YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11120698, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVFSVLLL LGLCGKMASG GQPAFDNTPG ALNYELPTTE YETQDTFNAG IIDPLYQMVH  60
   61 IFLNVVQPND FPQDLVKKLI QKRFDISVDT KEVAIYEIGV LICVILGLLF IFLMPLVGFF 120
  121 FCMCRCCNKC GGEMHQRQKQ NESCRRKCLA ISLLLICLLM SLGIAFGFVA NQQTRTRIQR 180
  181 TQKLAESNYR DLRALLTEAP KQIDYILGQY NTTKNKAFSD LDSIDSVLGG RIKGQLKPKV 240
  241 TPVLEEIKAM ATAIRQTKDA LQNMSSSLKS LRDASTQLST NLTSVRNSIE NSLNSNDCAS 300
  301 DPASKICDSL RPQLSNLGSN HNGSQLPSVD RELNTVNDVD RTDLESLVKR GYMSIDEIPN 360
  361 MIQNQTGDVI KDVKKTLDSV SFKVKNMSQS IPVEEVLLQF SHYLNAAPGT STKSLPRVEE 420
  421 YDSYWWLGGL IVCFLLTLIV TFFYLGLLCG VFGYDKRATP TRRGCVSNTG GIFLMAGVGF 480
  481 SFLFCWILMI LVVLTFVVGA NVEKLLCEPY ENKKLLQVLD TPYLLNDQWQ FYLSGILLKN 540
  541 PDINMTFEQV YRDCKRGRGV YATFQLENVF NITENFNIER LSEDIVKELE S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle