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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PGAP1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLHSVNLWN LAFYVFMVFL ATLGLWDVFF GFEENKCSMS YMFEYPEYQK IELPKKLTKR  60
   61 YPAYELYLYG EGSYAEEHKI LPLTGIPVLF LPGNAGSYKQ VRSIGSIALR KAEDIDFKYH 120
  121 FDFFSVNFNE ELVALYGGSL QKQTKFVHEC IKAILKLYKG QEFAPTSVAI IGHSMGGLVA 180
  181 RALLTLKNFK QDLINLLVTQ ATPHVAPVMP LDRFITEFYM NVDNYWILNA RHINLTTLSV 240
  241 AGGFRDYQVR SGLTFLPKLS HYTSALSVVS SAVPKTWVST DHLSIVWCKQ LQLTTIRAFF 300
  301 DLIDADTKQI TQKPKKKLSV LNHHFIRHPA KQFEENPSII SDLTGTSMWV PVKVSRWSYV 360
  361 AYNESDKIYF AFPLANHRKI YTHAYCQSTM LDTNSWIFGC INSTSMCRQG VDLSWKAELL 420
  421 PTIKSLTLRL QDYPSLSHIV VYVPSVHGSK FVVDCEFFKK EARSMQLPVT HLFSFGLSSR 480
  481 KVTLNTNGLY YNIELLNFGQ IYQAFKVNVV SKCTGSKEEI TSIYKLHIPW SYEDSLTIAQ 540
  541 VPSSTDISLK LHVAQPENDS HVALLKMYTS SDCQYVVTIK TSFPQILGQV VRFHGGALPA 600
  601 YVVSSILLAY GGQLYSLLST GYCLEYSTIL DKEAKPYKVD PFVIMIKFLL GYKWFKELWD 660
  661 AVLLPELDAI VLTSQSMCFP LVSLILFLFG TCTAYWSGLL SSTSVQLLSS LWLALKRPAE 720
  721 LPKDIKVMSP DLPVLTVVFL IVSWTTCGAL AILLSYLYYV FKVVHLQASL TTFKNNQPVN 780
  781 PKHSRRSEKK SNHHKDSAVQ SLRLCANDAE DSLRMHSTVI NLLTWVVLLS MPSLIYWLKN 840
  841 LRYYFKLSPD PCKPLAFLLI PAIAILGNTH TVSVKSSKLL KTVSQFPLPL AVGVIAFGSS 900
  901 HLYRVPCFVI IPLVFHALCN FM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle