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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STM_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRTVFVPL ILAFVGVSIS APVSNNNGTD NDESAADQRH IFTVQFNVGT PAPADGDSVT  60
   61 TDGKDSAEKN EAPGDSSDTT EKPGTTDGKD SAEQHGVTTD GKDEAEQHGV TTDGQDSAEK 120
  121 RGEADGAPDK PDTQNGTDDT DSDQETDASH HKTGDSDENK DKPSAEDHTD GNHAGKDSTD 180
  181 SKESPDTTDK PEGPDSDSAP DGDSASAEKT DSDHSPDEDA NKSSTEADKD DTSDKDSSQT 240
  241 DEKHDSDASD KDEKHEDKDE KSDEKDSSKD SEDKSQEKSD KSDDGSNSEA DEQKESVESK 300
  301 DHDSDSQDSD SAEKKEKHDD KDQDSSDSAD SKDSDEDKDK DHSEQKDSED HEHKEKHTKD 360
  361 KEEHKDSDEG KDDEDKSKSD EHDKDESESK EASKSDESEQ EEKKDDKSDS DNSSRDSHSD 420
  421 SDSDSHSDSD SDSHSDSHSD SDSDSHSDSD SDSDSDSDSD SDSDSDSNSR DKDEKKDKSS 480
  481 ESRDEDSSDS DSKSNSESSE TAEEDTNDDK DSSVEKDKTD SSDSASVEAN DSDDEHDDDS 540
  541 KDATPSSEDH TAEKTDEDSH DVSDDDDDID AHDDEAGVEH GTDEASKPHQ EPDHHDDTTH 600
  601 GSDDGRKTSM PIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle