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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|139948509, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECALWLAIF MLTILSPLII GAPPSISCPV KDIRIKGGSF SISKDGSSII FNCPENYYPT  60
   61 IRTRRCTKGR WSELPKGKRL ECKKITCPDP RAFLNGDVHP YSPRYYVNDT TRYFCQSGYD 120
  121 FRGSESRVCQ ANGKWSGSTP ICGRNSDYCP DPGVPAGTTR TGNMFHIGDK VTYRCDNKLS 180
  181 LIGSKERTCQ DNGQWSGTEP QCYADFTYDT PEEASDAFSS SLVSNLQLTQ LHEETDQYGK 240
  241 KIQVHKGGKL DIYIALDVSD SIDEEDFERA KDVIKTLIEK ISYYEVSPNY EILLFATDTD 300
  301 RIISMREFKN GQGKDLLKII QKLQDYAYDK KGQRSGTNIA QAYNKIYESM TIELMTNKED 360
  361 FKATQHIVIM FTDGQANMGG SPKPLVDKIK SLVRQNSVEE KLELYVFGLG NDVHAEDIND 420
  421 LKTDRANEKF FFKLKSLDDL KETFDNMIDE GNSVELCGLY KDYDDESESH KRRQYPWLAK 480
  481 ISVTRSTGKN SKCMGSFVTS SFILTAAHCF KVDDTPATIT IDLESENQGI KVKYIHSHPD 540
  541 YNIKAKLNLG IPEYYEFDVA LLQLEKPVKM SVSLRPICIP CTKETNGALR LSDREGTCKK 600
  601 HKELLMTGET VKAAFMSEVR TKTEQKDITI KQGKLRQACV EDAKKAAGMT AEKATDIVTD 660
  661 NFLCSGGIDP TTDEIACKGD SGGATFVVPG GRVVQVGIVS WGVKDLCKRS PKPRSESYTR 720
  721 DYHTNLFSAK ILSFLKKYLA DEKLGTPLTF M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle