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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125842228, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVAVFVLSF IWLVNGELLE ADQDAVVPGD WTFLGRVGPL EEVELTFALK QQNVSKMEEL  60
   61 LKLVSDPDSH QYGKYLSLDE VAALSRPSPL TEKVVENWLR SHGVMDCHTI ITRDFLQCVM 120
  121 TVEVAEALLP GSKFHRFSKN TKTLLRSTSQ YSVHEDVHQH LDFVGGVHRF PQKRKIVSKG 180
  181 WEGARQAILG YHLGVTPAVI RNRYNLTAKD VGTAANNSQA VAQFLEQYYH PADLAEFMSL 240
  241 FGGGFTHMST VERVVGTQGG GKAGIEASLD VEYIMSSGAN ISTWVFTNPG RHESQEPFLQ 300
  301 WMLLLSNMSA VPWVHTISYG DDEDSLSEAY MNRINIEFMK AGLRGISMLF ASGDSGAGCR 360
  361 HLTKERNTFR PSFPASSPYV TTVGGTSFQN PFKLSYEVTD YISGGGFSNV FPMPDYQVDA 420
  421 VRAYLKSVQS LPPQTYFNTT GRAYPDLAAL SDNYWVVSNR VPIPWVSGTS ASTPVVGGIL 480
  481 SLINDQRFLK GLPALGFINP RLYKMQGKGL YDVTVGCHLS CLDDKVEGKG FCASPSWDPV 540
  541 TGWGTPNYPV FLASLMD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle