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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|198282117, gi...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNECEDTITR FCFRTTGINM SYSPERMSSY RRHFEGGLAA SSTLQVRVSS PSPTRGATRH  60
   61 RSASYSRSTG RRALSGTRKS RMTSSVSMGT LCLGMGFGGA GGAVDLDAAA AENQAFLSTR 120
  121 TSERKEMIAL NDRLAVYIEK VRSLEQSNKL LETEIDAIKG HHVKPSGLRL LYEEQLREMK 180
  181 KIADQMKIQR DLAVAAKDAM AGQLEMLKVK YEEALEARKK AELEIEAFRP DVDAATSARI 240
  241 ALEKRLENLE VELEFLQRIH KKEIEELMAQ IYGSVAKVDV AFSLPDLASA LKQIQAQYDS 300
  301 IAAQNLQDMD AWYKGKFQDL NNVSSRHMET ARSAREEIMG YKKEMQNKQR ELDALKNRNE 360
  361 ALLLMIKEAQ ENYRKEEEEL HTRIETLKEE LRSIKGKIAL LLREYQDLLN VKMSLEIEIT 420
  421 TYRKLIEGED SRLSSMVGGL SLMGGSVSSG LVSSVSAYSS AAAAAAAVSS AASEKMISSN 480
  481 STLNHNHHES VEEFTHEQAV EMTERKTVLI RTVKTDEDTI QKDTEERTIT ISGAADEDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle