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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OTO1A_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNILHPFII IMTLLVVATG NQASIDKTTQ WPRMKPTKKP PPRDEGPSKL GSISTTVSPT  60
   61 AIGITEEVTD AMMDAYTITS TGSTTFSSDT YSADYHTEAM VPPGVGPGNY TLDYNECFFN 120
  121 FCECCPPERG PPGPVGEKGL PGIPGGKGEM GPPGPPGQEG LTGAPGTHGV KGEKGDTGAS 180
  181 GLPGIPGVTG KQGEKGESGP KGDKGDTGFP GLKGDPGERG EPGWNGTKGG MGEPGKQGLT 240
  241 GPPGPDGIKG EKGDKGDCPF GEKGQKGSIG EPGPQGPKGD PGVPGTNGTD GLPGSKGPKG 300
  301 DPGPLSKQGE PGPPGPQGPP GQRGMPGMKG TRGLKGARGI RGFKGFKGEP AVQKRSAFSV 360
  361 GLFPSRSFPP PGLPIRFDKI IYNEEAHWDP NASKFNCTHG GVYVFSYYIT VRNRPLRAAL 420
  421 VVNGIRKLRT RDSLYGQDID QASNMAVLRL SSGDQVWLET LRDWNGVYSS SEDDSTFSGF 480
  481 LLYADATKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle