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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPX_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSCGACTCG AAAARLLTTS LTSAQRGISC GRIHVPVLGR LGTLDTQILR RAPLRTFSET  60
   61 PAYFASKDGT NKDGSGDGNK KSVTEGSSKK SGSGNSGKGG NQLRCPKCGD LCTHVETFVS 120
  121 STRFVKCEKC HHFFVVLSEA DSKKSIIKEP ESAAEAVKLA FQQKPPPPPK KIYNYLDKYV 180
  181 VGQSFAKKVL SVAVYNHYKR IYNNIPANLR QQAEVEKQTS LTPRELEIRR REDEYRFTKL 240
  241 LQIAGISPHG NALGASMQQQ GSQQMPQEKR GGEVLDSPHD DIKLEKSNIL LLGPTGSGKT 300
  301 LLAQTLAKCL DVPFAICDCT TLTQAGYVGE DIESVIAKLL QDANYNVEKA QQGIVFLDEV 360
  361 DKIGSVPGIH QLRDVGGEGV QQGLLKLLEG TIVNVPEKNS RKLRGETVQV DTTNILFVAS 420
  421 GAFNGLDRII SRRKNEKYLG FGTPSNLGKG RRAAAAADLA NRSGESNTHQ DIEEKDRLLR 480
  481 HVEARDLIEF GMIPEFVGRL PVVVPLHSLD EKTLVQILTE PRNAVIPQYQ ALFSMDKCEL 540
  541 NVTEDALKAI ARLALERKTG ARGLRSIMEK LLLEPMFEVP NSDIVCVEVD KEVVEGKKEP 600
  601 GYIRAPSKES SEEDYDSGVE EDGWPRQADA ANS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle