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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109473955, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRALVLGL VLLRLGLHAV LWLVFGLGPS MGFYQRFPLS FGFQRLRDPD GSGPVGPPGG  60
   61 PSWLHRPRRG TEGRLETPPG PGPGPGVCGP AHWGYALGGG GCGLDEYERR YSGAFPPQLR 120
  121 AQMRDLARGM FVFGYDNYMA HAFPQDELNP IYCRGRGPDL GDPSNLNIND VLGNYSLTLV 180
  181 DALDTLAIMG NSSEFQKAVK LVINTVSFDK DSTVQVFEAT IRVLGSLLSA HRIITDSKQP 240
  241 FGDMTIEDYD NELLYMAHDL AVRLLPAFEN TKTGIPYPRV NLKTGVPPDS NNETCTAGAG 300
  301 SLLVEFGILS RLLGDSTFEW VARRAVKALW NLRSNDTGLL GNVVNIQTGH WVGKQSGLGA 360
  361 GLDSFYEYLL KSYILFGEKE DLEMFNAAYQ SIQSYLRRGR EACNEGEGDP PLYVNVNMFS 420
  421 GQLMNTWIDS LQAFFPGLQV LIGDVEDAIC LHAFYYAIWK RYGALPERYN WQLQAPDVLF 480
  481 YPLRPELVES TYLLYQATKN PFYLHVGMDI LQSLEKYTKV KCGYATLHHV IDKSKEDRME 540
  541 SFFLSETCKY LYLLFDEENP VHKSGTRYMF TTEGHIISVD KRLRELPWKE FFSEDGERDQ 600
  601 EEKFVHRPKS QELRVINSSS NCNRVPDERR YSLPLKSIYM RQIDQMVGLI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle