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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16758804, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLLFLTYL VFSCLTISWL KIWGKMTDSR PLSNSKVDAS LLPSKEESFA SDQSEEHGDC  60
   61 SCPLTTPDQE ELASHGGPVD ASQQRNSVPT SHQKPPRNPL SSNDTCSSPE LQTNGVAAPG 120
  121 SEVPEANGLP FPARPQTQRT GSPTREDKKQ APIKRQLMTS FILGSLDDNS SDEDPSSNSF 180
  181 QTSSRKGSRD SLGTCSQEAA LNTADPESHT PTMRPSMSGL HLVKRGREHK KLDLHRDFTV 240
  241 ASPAEFVTRF GGNRVIETVL IANNGIAAVK WMRSIRRWAY EMFRNERAIR FVVMVTPEDL 300
  301 KANAEYYKMA DPVLPVPGGP NNNNYANVEL IIDIAKRIPV QAVWAGWGHA SENPKLPELL 360
  361 CKHGIAFLGP RVRPMLGLGD RLSSTIVAQT LQIPTLPWSG SGLTVEWTED SQHQGKCISV 420
  421 TEDVYEQGCV RDVDEGLQAA EKVGFPLMIK ASEGGGGKGI RQAESAEDFP CFFRQVQSEI 480
  481 PGSPIFLMKL AQNARHLEVQ VLADQYGNAV SLFGRDCSIQ RRHQKIIEEA PANIAAPAVF 540
  541 EFMEQCAVLL AKTVVYVSAG TVGYLYSQDG SFHFLELNPR LQVEHPCTEM IADVNLPAAQ 600
  601 LQIAMGVPLH RLKDIRLLYG ESPWGVTPVS FETPLSPPIA RGHVIAARIT SENPDEAFKP 660
  661 SSGTVQELNF RSNKNVWGYF SVAAAGGLHE FPISQFGHCF SWGENQEEAI SNMVVALKEL 720
  721 SIRGDFRTTV EYLVNLLETE SLQNNDIDTG WLDHLIAQRV QAEKPDIMLG VVFGALNVAD 780
  781 AMFRTCITEF LHSLERGQVL PADSLLNIVD VELIYGGIKY VLKVARQSLT MFVLIMNGCH 840
  841 IEIDAHRPND GGLLLSYNGS SYTTYMKEEV DSYRITIGNK TCVFEKENDP TVLRSPSAGK 900
  901 LMQYTVEDGQ HVEVGSSYAE MEVMKMIMTL NVQESGRVNY IKRPGAVLEA GCVVAKLELD 960
  961 DPSKVHAAQP FTGELPAQQT LPILGERLHQ VFHSVLENLT NVMNGYCLPE PFFSMKLKDW1020
 1021 VEKPMMTLRH PSLPLLELQE IMTSVADRIP VPVEKAVRRV FAQDASNITS VLCQFPSQQI1080
 1081 ATILDCHAAT LQRKVDREAF FMNTQSIVQL IQRYRSGTRG IMKAVVLDLL RRYLNVEHHF1140
 1141 QQAHYDKCVI NLREQFKADM TRVLDCIFSH SQVAKKNQLV TMLIDELCGP DPTLSEELTS1200
 1201 ILKELTQLSR SEHCKVALRA RQVLIASHLP SYELRHNQVE SSSCQPLTCN GHQFCPENLK1260
 1261 KLILSETTIF DVLPTFFYHA NKVVCMASLE VYVRRGYIAY ELNSLQHREL PDGTCVVEFQ1320
 1321 FMLPSSHPNR MAMPINVSDP DLLRHSKELF MDSGFSPLCH QRMGAMVAFR RFEEFTRNFD1380
 1381 EVISCFANVP TDTPLFSKAC TSLYSEEDSK SLQEEPIHIL NVAIQCADHM EDERLVPVFR1440
 1441 AFVQSKKHIL VDYGLRRITF LIAQEKEFPK FFTFRARDEF AEDRIYRHLE PGLAFQLELS1500
 1501 RMRNFDLTAV PCANHKMHLY LGAAKVKEGL EVTDHRFFIR AIIRHSDLIT KEASFEYLQN1560
 1561 EGERLLLEAM DELEVAFNNT SVRTDCNHIF LNFVAHVIMD PLKIEESVRA MVMRYGSRLW1620
 1621 KLRVLQAQVK INIRQTTSDC AVPIRLFITN ESGYYLDISL YKEVTDSRSG NIMFHSFGNK1680
 1681 QGSLHGMLIN TPYVTKDLLQ AKRFQAQSLG TTYVYDFPEM FRQALFKLWG SPEKYGPDIL1740
 1741 TYTELVLDSQ GQLVEMNRLP GCNEVGMVVF KMRFKTPEYP EGRDTIVIGN DITFQIGSFG1800
 1801 IGEDFLYLRA SEMARTEGIP QIYLAANSGA VLGLSEEIKQ IFQVAWVDPE DPYKGFRYLY1860
 1861 LYLTPQDYTQ ISSQNSVHCK HIEDEGESGI IVDVIGKDSS LGVENLRGSG MIAGEASLAY1920
 1921 EKNVTISMVD CRAIGIGAYL VRLGQRVIQV ENSHIILTGA GALNKVLGRE VYTSNNQLGG1980
 1981 VQIMHTNGVS HVTVPDDFEG VCTILEWLSY IPKDNQSPVP IITPSDPIDR EIEFTPTKAP2040
 2041 YDPRWLLAGR PHPTLKGTWQ SGFFDHGSFK EIMAPWDQTV VTGRARLGGI PVGVIAVETR2100
 2101 SVEVAVPAHP ANLDSEAKII QQAGQVWFPD SAFKTAQVIR DFNQEHLLLM IFANWRGFSG2160
 2161 GMKDMSEQML KFGAYIVDSL RLSKQPVLIY IPPGAELRGG SWVVLDSSIN PLCIEMYADK2220
 2221 ESRGGVLEPE GTVEIKFRKK DLVKTIRRID PVCKKLLEPA GDTQLPDKDR KELESQLKAR2280
 2281 EDLLLPIYHQ VAVQFADLHD TPGHMLKKGI ISDVLEWKTT RTYFYWRLRR LLLEAQVKQE2340
 2341 ILRASPELSH EHTQSMLRRW FVETEGAVKA YLWDSNQVVV QWLEQHWSAR DNLRSTIREN2400
 2401 LNYLKRDSVL KTIQSLVQEH PEATMGLCGY LSQHLTPAEQ MQVVQLLSTT ESPASH

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