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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UNC5B_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARSGARGA LLLALLLCWD PTPSLAGIDS GGQALPDSFP SAPAEQLPHF LLEPEDAYIV  60
   61 KNKPVELHCR AFPATQIYFK CNGEWVSQKG HVTQESLDEA TGLRIREVQI EVSRQQVEEL 120
  121 FGLEDYWCQC VAWSSSGTTK SRRAYIRIAY LRKNFDQEPL AKEVPLDHEV LLQCRPPEGV 180
  181 PVAEVEWLKN EDVIDPAQDT NFLLTIDHNL IIRQARLSDT ANYTCVAKNI VAKRRSTTAT 240
  241 VIVYVNGGWS SWAEWSPCSN RCGRGWQKRT RTCTNPAPLN GGAFCEGQAC QKTACTTVCP 300
  301 VDGAWTEWSK WSACSTECAH WRSRECMAPP PQNGGRDCSG TLLDSKNCTD GLCVLNQRTL 360
  361 NDPKSRPLEP SGDVALYAGL VVAVFVVLAV LMAVGVIVYR RNCRDFDTDI TDSSAALTGG 420
  421 FHPVNFKTAR PSNPQLLHPS APPDLTASAG IYRGPVYALQ DSADKIPMTN SPLLDPLPSL 480
  481 KIKVYDSSTI GSGAGLADGA DLLGVLPPGT YPGDFSRDTH FLHLRSASLG SQHLLGLPRD 540
  541 PSSSVSGTFG CLGGRLTIPG TGVSLLVPNG AIPQGKFYDL YLRINKTEST LPLSEGSQTV 600
  601 LSPSVTCGPT GLLLCRPVVL TVPHCAEVIA GDWIFQLKTQ AHQGHWEEVV TLDEETLNTP 660
  661 CYCQLEAKSC HILLDQLGTY VFTGESYSRS AVKRLQLAIF APALCTSLEY SLRVYCLEDT 720
  721 PAALKEVLEL ERTLGGYLVE EPKTLLFKDS YHNLRLSLHD IPHAHWRSKL LAKYQEIPFY 780
  781 HVWNGSQKAL HCTFTLERHS LASTEFTCKV CVRQVEGEGQ IFQLHTTLAE TPAGSLDALC 840
  841 SAPGNAATTQ LGPYAFKIPL SIRQKICNSL DAPNSRGNDW RLLAQKLSMD RYLNYFATKA 900
  901 SPTGVILDLW EARQQDDGDL NSLASALEEM GKSEMLVAMT TDGDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle