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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SAP_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYALALLASL LVTALTSPVQ DPKICSGGSA VVCRDVKTAV DCRAVKHCQQ MVWSKPTAKS  60
   61 LPCDICKTVV TEAGNLLKDN ATEEEILHYL EKTCAWIHDS SLSASCKEVV DSYLPVILDM 120
  121 IKGEMSNPGE VCSALNLCQS LQEYLAEQNQ RQLESNKIPE VDLARVVAPF MSNIPLLLYP 180
  181 QDRPRSQPQP KANEDVCQDC MKLVTDIQTA VRTNSSFVQG LVDHVKEDCD RLGPGVSDIC 240
  241 KNYVDQYSEV AVQMMMHMQP KEICVMVGFC DEVKRVPMRT LVPATEAIKN ILPALELTDP 300
  301 YEQDVIQAQN VIFCQVCQLV MRKLSELIIN NATEELLIKG LSKACSLLPA PASTKCQEVL 360
  361 VTFGPSLLDV LMHEVNPNFL CGVISLCSAN PNLVGTLEQP AAAIVSALPK EPAPPKQPEE 420
  421 PKQSALRAHV PPQKNGGFCE VCKKLVIYLE HNLEKNSTKE EILAALEKGC SFLPDPYQKQ 480
  481 CDEFVAEYEP LLLEILVEVM DPSFVCSKIG VCPSAYKLLL GTEKCVWGPG YWCQNSETAA 540
  541 RCNAVDHCKR HVWN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle