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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PCSK4_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPSQTALWL GLVLSLALLA VGWASARPPI YVSSWAVRVT KGYQEAERLA RKFGFVNLGQ  60
   61 IFPDDQYFHL RHRGVAQQSL TPHWGHRLRL KKEPKVRWFE QQTLRRRVKR SLVVPTDPWF 120
  121 SKQWYMNKEI EQDLNILKVW NQGLTGRGVV VSILDDGIEK DHPDLWANYD PLASYDFNDY 180
  181 DPDPQPRYTP NDENRHGTRC AGEVSATANN GFCGAGVAFN ARIGGVRMLD GAITDIVEAQ 240
  241 SLSLQPQHIH IYSASWGPED DGRTVDGPGL LTQEAFRRGV TKGRQGLGTL FIWASGNGGL 300
  301 HYDNCNCDGY TNSIHTLSVG STTRQGRVPW YSEACASTFT TTFSSGVVTD PQIVTTDLHH 360
  361 QCTDKHTGTS ASAPLAAGMI ALALEANPLL TWRDLQHLVV RASRPAQLQA EDWRINGVGR 420
  421 QVSHHYGYGL LDAGLLVDLA RVWLPTKPQK KCTIRVVHTP TPILPRMLVP KNVTVCCDGS 480
  481 RRRLIRSLEH VQVQLSLSYS RRGDLEIFLT SPMGTRSTLV AIRPLDISGQ GYNNWIFMST 540
  541 HYWDEDPQGL WTLGLENKGY YYNTGTLYYC TLLLYGTAED MTARPQTPQE SHCPLSIVAE 600
  601 LCLISSKQWW WLYSHTQQPV TKGQDSCHPP TTPARQLDQR LHCLFPAPHA GSASEPLQGL 660
  661 SPLAAILAIS LGPWCCPC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle