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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHSTF_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHCINCCIQ LFPEDAHKQQ VACQGGPHHS HQACPSCKGE DKILFRVDSK QMNLLAVLEV  60
   61 RTEGNENWGG FLRFRKGKRC SLVFGLIIMT LVMASYILSG AHQELLISSP FHYGGFPSNP 120
  121 SVMDSESPSD VKEHHYQPSV NNISYVKDYP NIKLIIDSIA ARNEFTTRQL PDLQDLKRQE 180
  181 LHMFSVIPNK FLPTSKSPCW YEEFSGRNTT DPYLTNSYVL YSKRFRSTFD TLRKAFWGHL 240
  241 SHVHGKHFRL RCLPHFYIIG QPKCGTTDLY DRLRLHPEVK FSAIKEPHWW TRKRFGIVRL 300
  301 RDGLRDRYPV EDYLDLFDLA AHQIHQGLQA ASAEQTSKMN RIIIGEASAS TMWDNNAWTF 360
  361 FYDNSTDGEP PFLTQDFIHA FQPEAKLLVM LRDPVERLYS DYLYFASSNK SADDFHEKVT 420
  421 EALQLFENCM LDYSLRACVY NNTLNNAMPV RLQVGLYAVY LLDWLTVFSK EQFLILRLED 480
  481 HASNVKYTMH KVFQFLNLGP LSEKQEALMT KSPASNTRRP EDRSLGPMWP ITQKILRDFY 540
  541 GPFNTRLAQV LDDEAFAWKT T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle