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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DOPO_RAT
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPHLSHQPC WSLPSPSVRE AASMYGTAVA IFLVILVAAL QGSEPPESPF PYHIPLDPEG  60
   61 TLELSWNVSY DQEIIHFQLQ VQGPRAGVLF GMSDRGEMEN ADLVMLWTDG DRTYFADAWS 120
  121 DQKGQIHLDT HQDYQLLQAQ RVSNSLSLLF KRPFVTCDPK DYVIEDDTVH LVYGILEEPF 180
  181 QSLEAINTSG LHTGLQQVQL LKPEVSTPAM PADVQTMDIR APDVLIPSTE TTYWCYITEL 240
  241 PLHFPRHHII MYEAIVTEGN EALVHHMEVF QCTNESEAFP MFNGPCDSKM KPDRLNYCRH 300
  301 VLAAWALGAK AFYYPEEAGV PLGSSGSSRF LRLEVHYHNP RNIQGRRDSS GIRLHYTASL 360
  361 RPNEAGIMEL GLVYTPLMAI PPQETTFVLT GYCTDRCTQM ALPKSGIRIF ASQLHTHLTG 420
  421 RKVITVLARD GQQREVVNRD NHYSPHFQEI RMLKNAVTVH QGDVLITSCT YNTENRTMAT 480
  481 VGGFGILEEM CVNYVHYYPK TELELCKSAV DDGFLQKYFH IVNRFGNEEV CTCPQASVPQ 540
  541 QFASVPWNSF NRDMLKALYN YAPISVHCNK TSAVRFPGNW NLQPLPNITS AVEEPDPRCP 600
  601 IRQTRGPAGP FVVITHGGRH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle