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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11138240
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHSMGVGRR KLAPFWVLAL ALTFNQHTGQ ALEDTRKSHL EHYSDLSQPQ GHVGTPLNRV  60
   61 TIIPPLKTIP VVRAFNPAHT RRVCSTWGNF HYKTFDGQVF YFPGLCNYVF SEHCGAAYED 120
  121 FNIQLRRGLE SNSTTLSRVI MKLDGLVVEL TKSSVLVNNH PVQLPFSQSG VLIELSNGYL 180
  181 KVVARLGLVF MWNDDDSLLL ELDTKYANKT CGLCGDFNGS PESSEFLSHN VRLTPLEFGN 240
  241 FQKMDGPTEQ CQDPLPVPQK NCSIRSSICE EILKGQLFSN CAALVDISSY LEACQQDLCL 300
  301 CESSDPSNCI CHTLAEYSRQ CAHAGGQPQN WRGPNLCPQT CLLNMEYQEC GSPCVDTCSN 360
  361 PQHSQVCEDH CVAGCFCPEG MVLDDSNQTG CVPVSQCACL YNGTLYAPGT SYSTDCTKCT 420
  421 CSGGQWSCQE VPCSGTCSVM GGSHISTFDE RQYTVHGDCS YVLCKPYDSN AFTVLAELRK 480
  481 CGLTESETCL KTVTLNLGGG KTVITVKATG EVFVNQIYTQ LPVSTANATF FRPSTFFIIG 540
  541 QTNLGLQLEI QLHPIMQVSV RIAPEFRGLT SGLCGNFNSM QADDFQTISG VVEGTAAAFF 600
  601 NTFKTQAACP NVKNIFEDPC SLSVENEKYA QHWCSQLTDA NGPFSQCHAT VNPSTFFSNC 660
  661 MFDTCNCEKS EDCLCAALSS YVRACAAKGV LLSDWREGIC AKPTITCPKS MTYQYHISTC 720
  721 QPTCRSLSEE DVTCHVNFIP VDGCTCPKGT FLDDSGKCVQ ATSCPCYYKG SPVPNGESVH 780
  781 DNGAICTCTQ GALTCIGGPV LTPVCDAPMI YFDCRNATPG DTGAGCQKSC HTLDMTCYSS 840
  841 ECVPGCVCPN GLVADGNGSC VVAEDCPCVH NEATYRPGET IQVGCNNCTC ENRMWQCTDK 900
  901 PCLATCAVYG DGHYITFDGQ RYSFSGDCEY TLLQDNCGGN GSSQDAFRVV TENIPCGTTG 960
  961 TTCSKGIKIF LGSYELKLSD SKMEVVQKGV GQEPPYFVHQ MGNYLVVETD IGLVLLWDKK1020
 1021 TSIFLRLSPE FKGKVCGLCG NFDDNAINDF TTRSQSVVSD MLEFGNSWKL SPSCPDASVS1080
 1081 KDPCTANPYR KSWAQKQCSI INSAAFSACH AHVEPAKYYE ACVNDACACD SGGDCECFCT1140
 1141 AVAAYAQACH EVGVCVSWRT PDICPLFCDY YNPEGQCEWH YQPCGAPCMR TCQNPTGQCL1200
 1201 QDLRGLEGCY PKCPPTAPIF DEGTMQCVSN CTVSPSPCRV NGKLYRPGTP IPSDENCYSC1260
 1261 VCTESGVNCT HDAGACVCTY NGQRYHPGDT IYHTTDGMGG CISAHCRDNG TIERIVDTCS1320
 1321 STSPPPPTTF SFSTTLVMTS MQPSSTHSSP TPSVVYPGSP SKAVLTASSV SSVKTPETTS1380
 1381 VLTTSTSAST LTMPACQEEC LWSPWMDISR PGRGIDSGDF DTLENLHAHG YQICPVPKAV1440
 1441 ECRAEDNPGV PFHALQQHVE CSTTVGLICY NSDQVSGLCD NYQIKIQCCT PINCPTSTGP1500
 1501 TQTTHLIVSR TSTMEDTTSS VPVTSTEHTY STVASSPSTH TPGPSPSSSV PSSSAPARST1560
 1561 PTPVSSTTVK TTLPTTSPMP EPTSATSSVS ISTLGSTLAS PEITHGCRKE LCNWTDWIDG1620
 1621 SYPEPGRSSG DFDTFVNLRA KGYKFCEKPW NVECRAQFFP NTPLQELGQD VTCSREVGLI1680
 1681 CLNKNQLPPI CYNYEIRIEC CTIVNICSTT SATTQPTSHG VSIKTKTNWI TNTYSFSTEN1740
 1741 TSGHSTVINT KTWVTGSTHT TPQPGTRPTP SIVSTQDTST SSVQTDSTTS SSHTSSPNTG1800
 1801 RVSTTHTTHT SSPPTGGTSP TSTTHTSSPN TGGTSPTSTT HTSSPXTGGT S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle