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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34868109, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPPRPLQL LGILFILSLS SVRLAQAGAY YGIKPLPPQI PPQIPPQIPQ YQPLGQQVPH  60
   61 MPLGKDGLSM GKEMPHMQYG KEYPHLPQYM KEIQPVPRVG KEVVPKKGKG EIPLASLRGE 120
  121 QGPRGEPGPR GPPGPPGLPG HGMPGIKGKP GPQGYPGIGK PGMPGMPGKP GAMGMPGAKG 180
  181 EIGPKGEIGP MGIPGPQGPP GPHGLPGIGK PGGPGLPGQP GAKGERGPKG PPGPPGLQGP 240
  241 KGEKGFGMPG LPGLKGPPGM HGPPGPVGLP GVGKPGVTGF PGPQGPLGKP GPPGEPGPQG 300
  301 LIGVPGVQGP PGMPGVGKPG QDGIPGQPGF PGGKGEQGLP GLPGPPGLPG VGKPGFPGPK 360
  361 GDRGIGGVPG ALGPRGEKGP VGAPGIGGPP GEPGLPGIPG PMGPPGAIGF PGPKGEGGIV 420
  421 GPQGPPGPKG EPGLQGFPGK PGFLGEVGPP GMRGLPGPIG PKGEAGHKGL PGLPGVPGLL 480
  481 GPKGEPGIPG DQGLQGPPGI PGIAGPSGPI GPPGIPGPKG EPGLPGPPGF PGVGKPGVAG 540
  541 LHGPPGKPGA LGPQGQPGLP GPPGPPGPPG PPAVMPPTPS PQGEYLPDMG LGIDGVKPPH 600
  601 AYAGKKGKNG GPYEMPAFTA ELTVPFPPVG APVKFDKLLY NGRQNYNPQT GVFTCEVPGV 660
  661 YYFAYHVHCK GGNVWVALFK NNEPMMYTYD EYKKGFLDQA SGSAVLLLRP GDRVFLQMPS 720
  721 EQAAGLYAGQ YVHSSFSGYL LYPM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle